SE3020003

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_140
  • Malus domestica
  • SE3020003
  • Mutator
  • MadM3
  • MDC013105.354:7154-7316
  • ATTTTAAAA
  • TTTTAAAAAGGGAGTTTTAACGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
A        A     TT         -CACTTCKYAT   GTTCAT      C      CCATATTTT   CTTTTCCTGGTACTAT
 TTTTAAAA GGGAG  TTAACGAAA           ACT      TTTTAA GAAAAA         TAC                
 |||||||| |||||  |||||||||           |||      |||||| ||||||         |||                 
 AAAATTTT CCTTT  GATTGTTTT           TGA      AAAATT CTTTTT         TGT                
A        A     -T         TCAAMTTTTTT   --AATC      K      -------AC   TTATTTACACYCCACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3