SE3020004

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_141
  • Malus domestica
  • SE3020004
  • Mutator
  • MadM4
  • MDC012303.704:2929-3116
  • TTCATTTTG
  • GGGGTAATGCTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCATTTT             GAAA                      -     YA    A     ------------------------  ACCAATAGAAATAAG
        GGGGTAATGCTAG    ATTAAATTTGTAGATAAAATTT GTAAA  AAAT ATGTG                        TC               
        |||||||||||||    |||||||||||||||||||||| |||||  |||| |||||                        ||               C
        TCCCATTACGATT    TGATTTAAACATCTGTTTTAAA CATTT  TTTA TATAC                        AT               
GTTTTACT             ACTC                      A     GA    C     CTTCGAATACTAACCTAATAATAA  TCGTAACTATTTRTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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