SE3020008

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_145
  • Malus domestica
  • SE3020008
  • Mutator
  • MadM7
  • MDC002183.547:1011-1227
  • TGTAATATG
  • GTAATATGGGAACCGGATTCTTTCCGGATCCTTTAAAACTGAGTCCACTAATCAATGAATTTGAGCCGTTGGAATTTGATCCAACGACTA

Secondary structure and sequence

TSD    TIR
5'



3' 
T   A        C                  T      C     C                     C             C     A   CAAACAAGAAGCCCCCC
 GTA TATGGGAA CGGATTCTTTCCGGATCC TTAAAA TGAGT CACTAATCAATGAATTTGAGC GTTGGAATTTGAT CAACG CTA                 
 ||| |||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||| |||                 T
 TAT ATGTCCTT GCCTAGGGGAGGCCTAGG GGTTTT ACTCG GTGATTAGTTACTTAAGCTTG CAACTTTAAACTA GTTGC GAT                 
G   A        A                  T      A     A                     A             C     C   ATTAATAATATTTAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3