SE3020009

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_146
  • Malus domestica
  • SE3020009
  • Mutator
  • MadM8
  • MDC010951.143:934-1105
  • AATAATAAA
  • GGATAATGCTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
AATAATAAA  A         --    - CCAAATTTCCAAACCAAATGATGTGTTACAAATAGAAAATAAGCACGTTAATCAACAC
         GG TAATGCTAG  GGAG A                                                          
         || |||||||||  |||| |                                                          T
         CC ATTATGATC  GTTT A                                                          
AAATAATAA  C         TA    A AGATTTAATTTAAAACATTTGGTTTACTACACCTCCAACTACTAACCTATTAATAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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