SE3020018

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_155
  • Malus domestica
  • SE3020018
  • Mutator
  • MadM4
  • MDC017714.168:20793-20968
  • TTTTCAAAT
  • GGGTAATGCTAGGTTGACTAAATTTGCAAACTAAATGATGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTCAAAT             TT        --------------   C               -------------------TC  CAATAAGAAATAAGCA
         GGGTAATGCTAGG  GACTAAAT              TTG AAACTAAATGATGTG                     AC                
         |||||||||||||  ||||||||              ||| |||||||||||||||                     ||                T
         CCCATTACGATCC  CTGATTTA              AAC TTTGATTTACTGTAC                     TG                
TAAACTTTT             CT        CACATCTGATTTAA   A               CTTCAACTACTAACTTAATAA  AATTCACAACTAATGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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