SE3020030

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_167
  • Malus domestica
  • SE3020030
  • Mutator
  • MadM8
  • MDC007287.149:43825-44002
  • ATTTTAATA
  • TTTAATATGGGTAATGTTAGGGAGACTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
 AT     T             G          ---ATT    ATTAAATTGGCAAACCAAATGATGTGTCACCAACAGAAAATAAACACG
   TTTAA ATGGGTAATGTTA GGAGACTAAA      CTAA                                                
   ||||| ||||||||||||| ||||||||||      ||||                                                T
   AAATT TACCCATTACGAT CCTCTGGTTT      TTTG                                                
TAT     -             G          AAAAAA    GTTTACTACACCAAAAAATACTAACCTAATAATGAGTTTGCAACTAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3