SE3020062

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_199
  • Malus domestica
  • SE3020062
  • Mutator
  • MadM8
  • MDC012728.444:8300-8488
  • ATCACCTAA
  • GAGTAATGCTAGAGAGATCAAAATTTTAAATTAAATTTGTAAACCAAATGATGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATCACCTAA A     G    A          -     A                          ------------------------  ACAAATAGGAAATAAG
         G GTAAT CTAG GAGATCAAAA TTTTA ATTAAATTTGTAAACCAAATGATGTG                        TC                
         | ||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||                        ||                 
         C CATTA GATT CTCTAGTTTT AAAAT TAGTTTAAACGTTTGGTTTACTACAC                        AT                
AATCCACTA C     G    C          T     A                          CAACAACTAATAACCTAATAATAA  TCGTAACTAATTGAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3