SE3020065

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_202
  • Malus domestica
  • SE3020065
  • Mutator
  • MadM11
  • MDC017332.81:261-423
  • TTATTGTAG
  • AGGGGTGTGCTATCCACACACCCCAAATTACTTCTCACACACCCTTGTTAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATTGT         C               AA                   G       CTAT      -   TTCTTCA
       AGGGGTGTG TATCCACACACCCCA  TTACTTCTCACACACCCTT TTAATTT    CCGTTG ATC       
       ||||||||| |||||||||||||||  ||||||||||||||||||| |||||||    |||||| |||       A
       TCCCCACAC ATAGGTGTGTGGGGT  AATGAAGAGTGTGTGGGAA GATTAAA    GGTAGC TAG       
ATGTTAT         T               AA                   -       AGCT      C   CCTATTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3