SE3020068

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_205
  • Malus domestica
  • SE3020068
  • Mutator
  • MadM11
  • MDC002935.165:2037-2179
  • TATATTTTG
  • GGGGTGTGATATCCACACACCCCATTTTACTTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATATTTT        A              -----AT    CT   CACAC        AATT    G   TTG
        GGGGTGTG TATCCACACACCCC       TTTA  TCT     ATCTTTTT    TTCG CCG   
        |||||||| ||||||||||||||       ||||  |||     ||||||||    |||| |||    
        CCCCACAC ATAGGTGTGTGGGG       AAAT  AGG     TAGAAGAA    AAGT GGC   
TTTTATAT        G              AACTATT    AC   -CAAC        -GTT    A   TAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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