SE3020070

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_207
  • Malus domestica
  • SE3020070
  • Mutator
  • MadM21
  • MDC035578.8:5117-5253
  • TTTAGAAAG
  • AAAGGGAAGTGTTATTGGCACTTCAAAAATCTCATTCTACACTCCTCACAACTGTATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTAG        G                   A                TC  -AA        TTCT
     AAAGGGAA TGTTATTGGCACTTCAAAA TCTCATTCTACACTCC  AC   CTGTATTT    
     |||||||| ||||||||||||||||||| ||||||||||||||||  ||   ||||||||     
     TTTCCCTT ACAATAACCGTGAGGTTTT AGAGTAAGATGTGAGG  TG   GATATAAA    
AAAGA        A                   A                TT  AAA        TCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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