SE3020082

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_219
  • Malus domestica
  • SE3020082
  • Mutator
  • MadM4
  • MDC021686.385:9448-9623
  • TATTTTTAT
  • GAGTAATGCTAGGGAGACCAAATTTGTAAACTAAATGATGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTTTTAT                  C         --------------              ----TSA  AATAGGAAATGAGCACGRTTATC
         GAGTAATGCTAGGGAGAC AAATTTGTA              AACTAAATGATGTG       CC                       
         |||||||||||||||||| |||||||||              ||||||||||||||       ||                        
         CTCATTACGATCTCTTTG TTTAAACAT              TTGATTTACTATAC       TA                       
TATTTTTTT                  A         CTGATTTAAAACAT              CTTCAAC  CTCACCTAATAATGAATTTGCAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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