SE3020091

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_228
  • Malus domestica
  • SE3020091
  • Mutator
  • MadM4
  • MDC021716.184:641-815
  • TTTAAAATA
  • TTTAAAATAGGGTAATGTTAGGAAGATTAAATTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
        AAT              A            CAAC   AATGATGTGTCATAAATAAAAATAAACATATTTATCAACGTTTAA
   TTTAA   AGGGTAATGTTAGG AGATTAAATTTG    CTA                                             
   |||||   |||||||||||||| ||||||||||||    |||                                             G
   AAATT   TCCCATTACGATCT TCTGATTTAAAC    GTT                                             
ATA     ---              C            ATCT   TTAAAACTTTTGATTTCCTGTACTTTCAATTACTAACCAAATAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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