SE3020100

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_237
  • Malus domestica
  • SE3020100
  • Mutator
  • MadM11
  • MDC005361.264:62-227
  • TTGGTATTA
  • TGGTATTAGGGGTTTGATATCCACACACCCCTTTTTACTTCTCACACACCCTTCTAATTTTTGGCCGTCGGATC

Secondary structure and sequence

TSD    TIR
5'



3' 
T        -     T  A           -  C      C               --C      T  G C  CG    GGATGAA
 TGGTATTA GGGGT TG TATCCACACAC CC TTTTTA TTCTCACACACCCTT   TAATTT TG C GT  GATC       
 |||||||| ||||| || ||||||||||| || |||||| |||||||||||||||   |||||| || | ||  ||||       A
 ATTATGGT CCCCA AC ATAGGTGTGTG GG AAAAAT AAGAGTGTGTGGGGA   ATTAAA AC G CA  CTAG       
         T     C  A           A  T      -               ACA      T  A A  -A    AAGAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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