SE3020106

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_243
  • Malus domestica
  • SE3020106
  • Mutator
  • MadM21
  • MDC035578.8:5116-5253
  • TTTCTAAAG
  • AAAGGGAATTGTTATTGGCACTCCAAAATTCTCATTCTACACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTTCT        T             C     T                AAA   TCTATATTTAGAA
      AAAGGGAA TGTTATTGGCACT CAAAA TCTCATTCTACACTCC   CTT             
      |||||||| ||||||||||||| ||||| ||||||||||||||||   |||             A
      TTTCCCTT ACAATAACCGTGA GTTTT AGAGTAAGATGTGAGG   GTG             
TAAATC        C             A     T                --A   TTGACATAAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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