SE3060126

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_263
  • Malus domestica
  • SE3060126
  • Mim
  • MadMi1
  • MDC015757.243:7303-7534
  • TATATATA
  • TATATATAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
        G TAAT  AA     G                      CT           A      - --            T A               G            T  GGCC
TATATATA A    GG  TCCTT AACAAGAGGGATCCCCATTTTT  AAAAAAATGGG ACACCC C  GACCGTTGGATT G CTTTAATGAAATTGT TGGTTGAGATTG GT    
|||||||| |    ||  ||||| ||||||||||||||||||||||  ||||||||||| |||||| |  |||||||||||| | ||||||||||||||| |||||||||||| ||     
ATATATAT T    CC  GGGAA TTGTTCTCCCTAGGGGTAAAAA  TTTTTTTACCC TGTGGG G  CTGGCAACCTAA C GAAATTACTTTAACA ACCAACTCTAAT TA    
        G ----  --     A                      -T           C      A AA            T -               G            T  GTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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