SE3020133

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_270
  • Malus domestica
  • SE3020133
  • Mutator
  • MadM45
  • MDC009251.535:14317-14477
  • TTTCGAATC
  • TTCGAATCGGATAATATTAGGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
 T      TC               TATTAAATTTTAA    A    G                  TCAATAAGAAAAAAAAYACTT
  TTCGAA  GGATAATATTAGGGA             ACTA ATTT TAAATCAAATGATGTGTT                     
  ||||||  |||||||||||||||             |||| |||| ||||||||||||||||||                     A
  AAGCTT  CCTATTATAATCTCT             TGGT TAAA ATTTGGTTTACTACACAA                     
TT      -T               ------------C    C    A                  CAACTACTAATATAATAATGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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