SE3020155

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_292
  • Malus domestica
  • SE3020155
  • Mutator
  • MadM47
  • MDC019272.101:4144-4281
  • TTTTCCCAA
  • CAAGAGTAATGCTACACTTACCACATTTTTACCACCTTTCTAATAGAGGTAGGGCCCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
   TTTTCC       AA    A ACT          T        T            A   -C    CAAC
         CAAGAGT  TGCT C   TACCACATTT TACCACCT TCTAATAGAGGT GGG  CCAC    
         |||||||  |||| |   |||||||||| |||||||| |||||||||||| |||  ||||     
         GTTTTTA  ACGA G   ATGGTGTAAA ATGGTGGA AGATTATCTCTA CCC  GGTG    
AACCCTTTT       CG    - --C          C        T            -   TA    TACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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