SE3020194

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_331
  • Malus domestica
  • SE3020194
  • Mutator
  • MadM21
  • MDC012269.204:4004-4140
  • AAATACAAG
  • GGGAACTGTTAATAGTACTCTAAAAATTTTATTTTACACTTCTCACAAGTGTATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAATACAA     C     A     C                TA      TC  -AAG    T  TTCW
        GGGAA TGTTA TAGTA TCTAAAAATTTTATTT  CACTTC  AC    TGTA TT    
        ||||| ||||| ||||| ||||||||||||||||  ||||||  ||    |||| ||     
        CCCTT ACAAT ATTGT AGGTTTTTAGAGTAAA  GTGAGG  TG    ATAT AA    
AACATAAA     A     A     A                CC      TT  AAAG    T  TTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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