SE3020213

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_350
  • Malus domestica
  • SE3020213
  • Mutator
  • MadM7
  • MDC016122.368:16520-16735
  • ATTTTCTTT
  • TGGATCAGGATCCTCTCCTGACCTTACAAAACTGAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTTTCTT                 C        C          CTAC    C  CCA       CC              C     C     T  TTATA   TTT
        TGGATCAGGATCCTCTC TGACCTTA AAAACTGAGC    TGAG AG   ATCGTGG  GTTGAAATTTGATT AACGG TACAA TA     ACT   
        ||||||||||||||||| |||||||| ||||||||||    |||| ||   |||||||  |||||||||||||| ||||| ||||| ||     |||   A
        ACCTAGTCCTAGGAGAG ACTGGAAT TTTTGACTCG    ACTC TC   TAGCACC  CAACTTTAAACTAG TTGTC ATGTT GT     TGG   
TTTCTTTT                 T        T          AACC    A  CTC       AA              T     T     T  -TCCC   CAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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