SE3020226

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_363
  • Malus domestica
  • SE3020226
  • Mutator
  • MadM11
  • MDC007843.299:2441-2604
  • TATCATTTT
  • GGGTGGTGCAATCCACACACCCATTTTTACCTCTCACACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATCATTTT         A  C A       A       -   T       GCTCTC     GCAG    C  --A  AAATGA
         GGGTGGTGC AT C CACACCC TTTTTAC CTC CACACCC      AATTT    CCGT GA   TC      
         ||||||||| || | ||||||| ||||||| ||| |||||||      |||||    |||| ||   ||       
         CCCATCACG TA G GTGTGGG AAAAATG GGG GTGTGGG      TTAAA    GGTA CT   AG      
TTTTACTAT         A  A C       A       A   T       -AACAA     AACA    A  ATA  AAGTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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