SE3020239

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_376
  • Malus domestica
  • SE3020239
  • Mutator
  • MadM21
  • MDC013695.210:343-479
  • TATTCAAAG
  • AGGGAATTGTTATTAGCAYTCMAAAAATCTCATTCTACACTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTCAA                  Y  M      C     CT       TCACAAGTGTATTTTT       AT
       AGGGAATTGTTATTAGCA TC AAAAAT TCATT  ACACTCT                CTTTCTA  
       |||||||||||||||||| || |||||| |||||  |||||||                |||||||   
       TCTCTTAACAATAATCGT AG TTTTTA AGTAA  TGTGAGG                GAAAGAT  
AAACTTA                  R  G      R     AC       -------------TTT       AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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