SE3020241

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_378
  • Malus domestica
  • SE3020241
  • Mutator
  • MadM63
  • MDC013915.201:4774-4935
  • TAATACTAA
  • AGAGTAATGCAATGGAGACTAAATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATACTA          AAT            ---A   AA  AAATGAGGTGTCACCAATAACAAATGAACATGTTTATCA
        AGAGTAATGC   GGAGACTAAATT    ACA  TC                                       
        ||||||||||   ||||||||||||    |||  ||                                       A
        TCTCATTACG   TCTCTGATTTAA    TTG  AT                                       
AATCATAA          ATC            ACAT   --  TTATTATACCTTTAACCACTAACTTAATAATGAATTAGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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