SE3020250

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_387
  • Malus domestica
  • SE3020250
  • Mutator
  • MadM21
  • MDC000007.314:5778-5915
  • AAAATTAAG
  • GGGAAGTGTTATTGACACTTCAAAAATCTCATTCTACACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAATTAA     G        A         AA                TCACAAGTGTATTTTT       AA
        GGGAA TGTTATTG CACTTCAAA  TCTCATTCTACACTCC                CTTTCTA  
        ||||| |||||||| |||||||||  ||||||||||||||||                |||||||   
        CCCTT ACAATAAC GTGAGGTTT  AGAGTAAGATGTGAGG                GAAAGAT  
AATTAAAA     A        C         CA                ------------TTTT       AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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