SE3020254

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_391
  • Malus domestica
  • SE3020254
  • Mutator
  • MadM21
  • MDC009573.387:585-721
  • ATATAGAAG
  • GGGAATTGTTATTGGCACTCCAAAAATCTCATTTTACACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATATAGAA     T             CC                     AAA   TCTATATTTAGAA
        GGGAA TGTTATTGGCACT  AAAAATCTCATTTTACACTCC   CTT             
        ||||| |||||||||||||  |||||||||||||||||||||   |||             A
        CCCTT ACAATAACCGTGA  TTTTTAGAGTAAGATGTGAGG   GTG             
AAGATATA     C             AA                     --A   TTCACATAAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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