SE3020261

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_398
  • Malus domestica
  • SE3020261
  • Mutator
  • MadM69
  • MDC011264.166:636-795
  • ATTTGTAGG
  • GTAGGGATGTGATATCTACACCTCTTTTTACTTCATTTACATTTTTTTAGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTT        G  A     --      CT         AT      T     A   ------------    ATCGTCGGATTGAA
    GTAGGGAT TG TATCT  ACACCT  TTTTACTTC  TTACAT TTTTT GTT            TTCG              
    |||||||| || |||||  ||||||  |||||||||  |||||| ||||| |||            ||||               
    TATCCCTA AC ATAGG  TGTGGG  AAAATGAAG  AGTGTG GAGAA CAA            AACT              
TGTT        A  A     TA      AT         --      C     A   TTAAATATAGGC    AGTAAAAGTTAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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