SE3020267

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_404
  • Malus domestica
  • SE3020267
  • Mutator
  • MadM12
  • MDC021635.363:1097-1313
  • TAACATAAC
  • GGAAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAACATAAC      -    CCGGTGGGAATCCTGTGATCGTGACCGTTCATCGTACATCATGCGATCAGTTTTCGTTAGGTATTATTTATACTTAATTTTAAAATTTT
         GGAAAA GGAT                                                                                         
         |||||| ||||                                                                                          
         CCTTTT CTAG                                                                                         
CAATACAAT      A    TAGCGGCCTAGAAAAAAGATACCTAGAACCCCTAAGGCATTAGCACTAGCAAGTAATATGTAGCACGTTAGTCTTTAGTAAAGTTTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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