SE3020274

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_411
  • Malus domestica
  • SE3020274
  • Mutator
  • MadM9
  • MDC022773.244:8697-8926
  • TATTTAATC
  • GAATGAGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTTAATC          -  TCTCCGGATCCTCTTTGTGAGGATCCTGGGGATCCTTAAATAGCGTCCGTTTACTGTACATCGTGTGGTCAGAAATCATTTTAAATACTTTTA
         GAATGAGGAT CC                                                                                             
         |||||||||| ||                                                                                             T
         CTTACTCCTA GA                                                                                             
CTAATTTAT          A  GAAACACTCTTAAAACTCTTAGGAGTTTAGCACAAGCAAGTAGCATGTAGCACGCTGGTAAAAAGCAGTTCATGATAAGTATAAATTAAAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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