SE3020281

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_418
  • Malus domestica
  • SE3020281
  • Mutator
  • MadM8
  • MDC013869.322:6945-7133
  • ATTTTATTA
  • GGGTAATGCTAGGGAGTTCAAATTATTTAAACCCAATTTGCAAACCAAATGATGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTTTATTA                T     TTA        C  T                     TGTAGATGATTGGATTATTAACTAAGTG
         GGGTAATGCTAGGGAG TCAAA   TTTAAACC AA TTGCAAACCAAATGATGTGGT                            
         |||||||||||||||| |||||   |||||||| || |||||||||||||||||||||                             
         CCTATTACGATCCCTC GGTTT   AAATTTGG TT AACGTTTGGTTTACTACACAG                            
ATTATTTTA                T     TAA        -  T                     TGGTTATTCTTTGTTCTTGCAATTAGCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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