SE3020283

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_420
  • Malus domestica
  • SE3020283
  • Mutator
  • MadM8
  • MDC029127.12:13028-13202
  • CTAAATAAT
  • GGATAATGCTAGGAGACCAAAATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
CTAAATAAT   -          -        A    AAACCAAATTTGTA            ---------------------AG  ACCAATAAGAAACAAGC
         GGA TAATGCTAGG AGACCAAA TTTT              AACCAAATGATG                       TC                 
         ||| |||||||||| |||||||| ||||              ||||||||||||                       ||                 A
         CCT ATTACGATCC TCTGGTTT AAAA              TTGGTTTACTAC                       TT                 
 TAATAAAT   C          C        A    ------------AW            ACCGACATCTCCTAACCTAATAA  GATTCACAGCTAATTGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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