SE3020288

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_425
  • Malus domestica
  • SE3020288
  • Mutator
  • MadM8
  • MDC001226.171:17463-17638
  • TACTACAAA
  • AGAGTAATGCTAGGGAGACCAAAATCTTAAACCAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TACTACAA         C               -C           ----------      TCACCAATAAAAAATAAGCACGTTAATCGAT
        AGAGTAATG TAGGGAGACCAAAAT  TTAAACCAAAT          GATGTG                               
        ||||||||| |||||||||||||||  |||||||||||          ||||||                               A
        TCTCATTAC ATCCCTCTGGTTTTA  AATTTGGTTTA          TTAGTA                               
AAACATCA         T               AA           AACATTTGAT      CACCAACATCTACTAACCTAATAATTAATTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3