SE3020295

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_432
  • Malus domestica
  • SE3020295
  • Mutator
  • MadM11
  • MDC025619.11:22056-22219
  • ATTTATAAG
  • TTATAAGGGGTGTGCTATCTACACATCATTTTTTACTTTTTACATACC

Secondary structure and sequence

TSD    TIR
5'



3' 
AT      --        C             T     A             CCTTG       C  -CATTCT    TTCTTCA
  TTATAA  GGGGTGTG TATCTACACATCA TTTTT CTTTTTACATACC     TTAATTT TG       GATC       
  ||||||  |||||||| ||||||||||||| ||||| |||||||||||||     ||||||| ||       ||||       A
  AATATT  CCCCACAC ATAGGTGTGTAGT AAAAA GAAGAGTGTGTGG     AATTAAA GC       CTAG       
        TA        T             T     A             --AAA       A  CAGCAAC    CTCATTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3