SE3020377

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_514
  • Malus domestica
  • SE3020377
  • Mutator
  • MadM21
  • MDC021612.161:7813-7949
  • TAGGAATTG
  • GGGAACTGTTATTTACACTCCAAAAATCTCATTCTACACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAGGAATT     C       TA                  CTA      TCACAAGTGTATTTTT       AT
        GGGAA TGTTATT  CACTCCAAAAATCTCATT   CACTCC                CTTTCTA  
        ||||| |||||||  ||||||||||||||||||   ||||||                |||||||   
        CCCTT ACAATAA  GTGAGGTTTTTAGAGTAA   GTGAGG                GAAAGAT  
TTAAGGAT     A       CC                  AAC      -------------TTT       AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3