SE3020390

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_527
  • Malus domestica
  • SE3020390
  • Mutator
  • MadM8
  • MDC015291.258:29889-30063
  • ATTGGATGA
  • AAGGGTAATGCTAGGGAGATCAAAATTTTAAACC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTGGATG                        A         TA     CAAATCAAATGATGTGTTACCAATAGAAAATAAGCACGTT
        AAGGGTAATGCTAGGGAGATCAAA TTTTAAACC  ATTTG                                        
        |||||||||||||||||||||||| |||||||||  |||||                                        A
        TTCCCATTACGATTCCTCTGGTTT AAGATTTGG  TTTAT                                        
  AGTAGA                        A         --     TACATCTGCAACTACTCACCTAATAATGAATTCACAACTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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