SE3020391

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_528
  • Malus domestica
  • SE3020391
  • Mutator
  • MadM11
  • MDC017855.301:5339-5502
  • TAAATCAAG
  • AGGGGTGTGATATCCACACACCCCTTTTTACTTCTCCCACACCTTTTTGGTTTTCGGCCGTTGGATC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAATCA         A                          C          --       CGG      G   GGATGAA
       AGGGGTGTG TATCCACACACCCCTTTTTACTTCTC CACACCTTTT  TGGTTTT   CCGTTG ATC       
       ||||||||| |||||||||||||||||||||||||| ||||||||||  |||||||   |||||| |||       T
       TCCCCACAC ATAGGTGTGTGGGGAAAAATGAAGAG GTGTGGGGAA  ATTAAAG   GGCAAC TAG       
AACTAAA         G                          T          CA       ATA      -   AAAAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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