SE3020431

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_568
  • Malus domestica
  • SE3020431
  • Mutator
  • MadM11
  • MDC018306.235:4500-4665
  • TTTAGAGAA
  • GAAGGGGTGTGATATCCACACACCCTTTTTTACTTCTCCCACACCTTTTTGGTTTTCGGCCGTCGGATC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTAGA           A                          C     -    -        C G    CG    GGATGAA
      GAAGGGGTGTG TATCCACACACCCTTTTTTACTTCTC CACAC CTTT TTGGTTTT G CCGT  GATC       
      ||||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||| | ||||  ||||       T
      TTTCCCCACAC ATAGGTGTGTGGGGAAAAATGAAGAG GTGTG GGAA AATTAAAG C GGCA  CTAG       
AAGAGA           G                          T     A    C        A A    -A    AAGAAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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