SE3020464

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_601
  • Malus domestica
  • SE3020464
  • Mutator
  • MadM49
  • MDC003588.466:5738-5901
  • TTGTTCAAC
  • TGTTCAACGAGTAATGTTATATTTATTATCTAATTATATCATTATTTGTATCATCTTTCTAATAAAGATACGACTCACA

Secondary structure and sequence

TSD    TIR
5'



3' 
T  TT   C   T        A    T      A  A   C                        A    AC  C     AAC
 TG  CAA GAG AATGTTAT TTTA TATCTA TT TAT ATTATTTGTATCATCTTTCTAATA AGAT  GA TCACA   
 ||  ||| ||| |||||||| |||| |||||| || ||| |||||||||||||||||||||||| ||||  || |||||    
 AC  GTT TTT TTACGATG GAAT GTAGAT AA ATG TAGTAAACATGGTAGAGAGATTAT TCTA  CT AGTGT   
A  TT   A   -        A    T      C  C   T                        C    CT  -     ACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3