SE3020472

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_609
  • Malus domestica
  • SE3020472
  • Mutator
  • MadM8
  • MDC029415.37:1544-1730
  • CTTTGAGAG
  • TTTGAGAGGGATAATGCTAGGAGACTAAATTTTTAAACCAAATTTGCAAACCAAATAATGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
C   G      A     C    -      A      A          - C         A     TCACCAATAGAAAATAAAC        --CAAC   TAAG
 TTT AGAGGG TAATG TAGG AGACTA ATTTTT AACCAAATTT G AAACCAAAT ATGTG                   ATATTAAT      ACT    
 ||| |||||| ||||| |||| |||||| |||||| |||||||||| | ||||||||| |||||                   ||||||||      |||     
 AGA TTTCCC ATTAC ATCC TCTGGT TAAAAA TTGGTTTAAA C TTTGGTTTA TACAC                   TATAATTA      TGA    
    G      C     A    C      G      A          A A         C     ------------------C        CTAATC   TAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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