SE3020483

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_620
  • Malus domestica
  • SE3020483
  • Mutator
  • MadM95
  • MDC012948.538:4126-4306
  • AAATATAAA
  • GAAAAATG

Secondary structure and sequence

TSD    TIR
5'



3' 
AAATATAAAAA  A     CTA     GCTCTCTTAAAGTGGGACTTTCCATGAACTCTGCCACCTTTGCCACCTCACAATTTAACATCAAT
           GA AAATG   AGGAG                                                                 
           || |||||   |||||                                                                  
           CT TTTAC   TCACT                                                                 
  AAAAATATA  C     -AA     CTGAAAGATATCTGAGAAACAGTGGAGTACAAAAAGCATGTTACAAAATATTACAACCGTACTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3