SE3020520

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_657
  • Malus domestica
  • SE3020520
  • Mutator
  • MadM103
  • MDC019747.177:3952-4080
  • TAAATTATG
  • AATTATGGGAATTGTTATTGACACACTCCAAAAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA    AT     T        ACA              CATCT       -    GAAAAAAAAAA
  AATT  GGGAA TGTTATTG   CACTCCAAAAATTT     TTCTATA TTTT           
  ||||  ||||| ||||||||   ||||||||||||||     ||||||| ||||           A
  TTAA  CCCTT ACAATAAC   GTGAGGTTTTTAGA     AAGATGT AGGA           
TA    AT     C        --Y              ---AT       R    GTGTTCACAWA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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