SE3020522

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_659
  • Malus domestica
  • SE3020522
  • Mutator
  • MadM15
  • MDC022652.164:673-842
  • CTCCAAGCA
  • GGAACCAGATCCCCTCCTGAGCAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
CTCCAAGCA      A              C   TCACA     C                   A  -     TATTATAA   T
         GGAACC GATCCCCTCCTGAG AAA     CGGGC GTTGAAATTTGATCCAACG CT GAAAT        CTT 
         |||||| |||||||||||||| |||     ||||| ||||||||||||||||||| || |||||        ||| T
         CCTTGG CTAGGGGAGGACTC TTT     GCCCG CAACTTTAAATTAGGTTGC GA CTTTG        GAG 
ACGAACCTC      C              A   CCTAG     A                   C  T     TCCCCGGG   A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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