SE3020536

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_673
  • Malus domestica
  • SE3020536
  • Mutator
  • MadM41
  • MDC012822.242:11451-11635
  • GTAGTCAAC
  • GTCAACGGATTTGGATCCTCTCCTGAGCCAATGGAGAGGATCCTCCTGACCAACCAT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTA T A                                                 C   AATTATTATAACTTTAA    ATCTCTTTGTTTGTAGTC
   G C ACGGATTTGGATCCTCTCCTGAGCCAATGGAGAGGATCCTCCTGACCAA CAT                 AATG                  
   | | ||||||||||||||||||||||||||||||||||||||||||||||||| |||                 ||||                  A
   C G TGCCTAAACCTAGGAGAGGACTCGGTTACCTCTCCTAGGAGGATTGGTT GTA                 CCTG                  
CAA T A                                                 A   --------------ATA    GCAACTTAAAAGTAGGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3