SE3020565

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_702
  • Malus domestica
  • SE3020565
  • Mutator
  • MadM11
  • MDC003451.570:14457-14618
  • ATAATAAGG
  • AGGGATGTGATATCCACACACCCTTTTTTACTTCTCTCACACCCTTTTAATTTTCGGCC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATAATA    A    A                                     --       C G  GTCC    GGATGAA
      AGGG TGTG TATCCACACACCCTTTTTTACTTCTCTCACACCCTTT  TAATTTT G CC    GATC       
      |||| |||| |||||||||||||||||||||||||||||||||||||  ||||||| | ||    ||||       T
      TCCC ACAC ATAGGTGTGTGGGAAAAAATGAAGAGGGTGTGGGGAA  ATTAAAA C GG    CTAG       
ATAATA    C    A                                     CA       A A  -AAA    AAGAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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