SE3020580

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_717
  • Malus domestica
  • SE3020580
  • Mutator
  • MadM21
  • MDC016719.242:13650-13782
  • TTAGAAGGG
  • TAGAAGGGAAGTGTTATTGGCACTTCAAAAATCTCATTCTACACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
T          G                   A                -TCACAAG       TTCT
 TAGAAGGGAA TGTTATTGGCACTTCAAAA TCTCATTCTACACTCC        TGTATTT    
 |||||||||| ||||||||||||||||||| ||||||||||||||||        |||||||     
 ATTTTCCCTT ACAATAACCGTGGGGTTTT AGAGTAAGATGTGAGG        ATATAAA    
G          A                   A                TTTAAAAG       TCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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