SE3020583

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_720
  • Malus domestica
  • SE3020583
  • Mutator
  • MadM12
  • MDC026313.28:5808-6039
  • GTTGACTAT
  • GTTGACTATGGACCAGGATCCTCGCCGGATCCATTCCCTAGGGATCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
         TAT G                                     A  AATCCCACAATCCTGTCCGTTCATCGTATATCGTGCGGTCAGAAATCATTTAAATTTTAAATTTT
   GTTGAC   G ACCAGGATCCTCGCCGGATCCATTCCCTAGGGATCCT GG                                                                 
   ||||||   | ||||||||||||||||||||||||||||||||||||| ||                                                                  
   CAGTTG   C TGGTCCTAGGAGCGGCCTAGGTAAGGGATCCCTAGGA GT                                                                 
TAT      --- G                                     C  TAAGATAGACAAGTAACATATAGCACGCCAGTCAAAAGCAATCCATGATAAATGAAAACTTAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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