SE3020589

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_726
  • Malus domestica
  • SE3020589
  • Mutator
  • MadM21
  • MDC020934.358:1981-2117
  • TTATATTAG
  • ATATTAGGGAATTGTTATTGGCACTCCAAAAATCTCATTCTACACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT    T      T                       C            AAA   TCTATATTTAGAA
  ATAT AGGGAA TGTTATTGGCACTCCAAAAATCT ATTCTACACTCC   CTT             
  |||| |||||| ||||||||||||||||||||||| ||||||||||||   |||             A
  TATA TCCCTT ACAATAACCGTGAGGTTTTTAGA TAAGATGTGAGG   GTG             
AT    T      C                       A            --A   TTCACATAAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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