SE3020616

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_753
  • Malus domestica
  • SE3020616
  • Mutator
  • MadM15
  • MDC000257.391:11723-11916
  • TCATGTAAA
  • CATGTAAAGGAACCGGATCCC

Secondary structure and sequence

TSD    TIR
5'



3' 
   T    TAA              -   C GAGTAAAGGATCTGGGCCGTTGAAATTTGATTCAATGACTACAAACAGGTGGTCACTCTAAAAGTTATAA
    CATG   AGGAACCGGATCCC CTC T                                                                      
    ||||   |||||||||||||| ||| |                                                                       
    GTAC   TCCTTGGCCTAGGG AAG A                                                                      
AAAT    ---              C   - CTCGAATCTTTCAACTCGGAGAACTCGTTTAGTGTATCCGGTAACTTTAAACTAGATTGCCGACGTTAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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