SE3020620

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_757
  • Malus domestica
  • SE3020620
  • Mutator
  • MadM11
  • MDC004963.298:1949-2110
  • AAAAATAGG
  • TAGGGGTGTGATATCCACACACCCTTTTTTACTTCTCACACACCCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAAA                                     A    CC   --ATTAA    T  CCG T    TTCTTCA
     TAGGGGTGTGATATCCACACACCCTTTTTTACTTCTC CACA  CTT       TTTC GT   C GATC       
     ||||||||||||||||||||||||||||||||||||| ||||  |||       |||| ||   | ||||       A
     ATCCCCACACTATAGGTGTGTGGGGAAAAATGAAGAG GTGT  GAA       AAAG CG   G CTAG       
TAAAA                                     G    -A   AAACCAA    C  ATA C    CCTACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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