SE3020658

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_795
  • Malus domestica
  • SE3020658
  • Mutator
  • MadM21
  • MDC016362.52:62939-63075
  • TAAAGAAAA
  • GAATTGTTATTAGCACTTCAAAAATCTCATTTGGCACTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAGAAAAT             C                  G       AAA   TCTATAATTAGAA
          GAATTGTTATTAG ACTTCAAAAATCTCATTT GCACTCT   CTT             
          ||||||||||||| |||||||||||||||||| |||||||   |||             A
          CTTGACAATAATC TGAGGTTTTTAGAGTAAA TGTGAGG   GTG             
AAAGAAATCC             A                  A       --A   TTCACATAAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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