SE3020661

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_798
  • Malus domestica
  • SE3020661
  • Mutator
  • MadM68
  • MDC011236.664:6140-6302
  • TTTAACTTA
  • AGGGTAATACTAGGGTGACTAAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTAACTT        A      T          TGTAC         -----   -----       TTCCCTTAG    T   TT
        AGGGTAAT CTAGGG GACTAAATTT     ACTAAATGA     CAT     GGAAGTG         ATTA TGT  
        |||||||| |||||| ||||||||||     |||||||||     |||     |||||||         |||| |||   
        TCCCATTA GATCTC CTGATTTAAA     TGATTTACT     GTG     CCTTTAC         TAGT ACG  
ATTCAATT        C      T          -TGTT         ACACA   GTTTT       TCATACAAA    T   AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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