SE3060669

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_806
  • Malus domestica
  • SE3060669
  • Mim
  • MadMi1
  • MDC011781.221:4204-4433
  • TATATAT
  • ATATATATG

Secondary structure and sequence

TSD    TIR
5'



3' 
TATATATATATAT         -----AAAA    AGGGATCCCCAGTTTTAAAAAAAAATGAGGACATCCTCTTGACCGTTAGATTTGACTTTAATGAAATTATGTGGTTGAGATTCTGTAGC
             ATATATATG         GGGA                                                                                         
             |||||||||         ||||                                                                                          
             TATATGTAC         CCTT                                                                                         
                      GGGAAATTS    SCSTAAGGATAAAAAGTTTTTTTATGCSTGTGGGAGAACTGGTAATTTAAACTGAAATTACTTTAATACACCGACTTTAATTTAGTGTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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